Omics / Client / get_annotation_store

get_annotation_store

Omics.Client.get_annotation_store(**kwargs)

Warning

Amazon Web Services HealthOmics variant stores and annotation stores will no longer be open to new customers starting November 7, 2025. If you would like to use variant stores or annotation stores, sign up prior to that date. Existing customers can continue to use the service as normal. For more information, see Amazon Web Services HealthOmics variant store and annotation store availability change.

Gets information about an annotation store.

See also: AWS API Documentation

Request Syntax

response = client.get_annotation_store(
    name='string'
)

Parameters:

name (string) –

[REQUIRED]

The store’s name.

Return type:

dict

Returns:

Response Syntax

{
    'id': 'string',
    'reference': {
        'referenceArn': 'string'
    },
    'status': 'CREATING'|'UPDATING'|'DELETING'|'ACTIVE'|'FAILED',
    'storeArn': 'string',
    'name': 'string',
    'description': 'string',
    'sseConfig': {
        'type': 'KMS',
        'keyArn': 'string'
    },
    'creationTime': datetime(2015, 1, 1),
    'updateTime': datetime(2015, 1, 1),
    'tags': {
        'string': 'string'
    },
    'storeOptions': {
        'tsvStoreOptions': {
            'annotationType': 'GENERIC'|'CHR_POS'|'CHR_POS_REF_ALT'|'CHR_START_END_ONE_BASE'|'CHR_START_END_REF_ALT_ONE_BASE'|'CHR_START_END_ZERO_BASE'|'CHR_START_END_REF_ALT_ZERO_BASE',
            'formatToHeader': {
                'string': 'string'
            },
            'schema': [
                {
                    'string': 'LONG'|'INT'|'STRING'|'FLOAT'|'DOUBLE'|'BOOLEAN'
                },
            ]
        }
    },
    'storeFormat': 'GFF'|'TSV'|'VCF',
    'statusMessage': 'string',
    'storeSizeBytes': 123,
    'numVersions': 123
}

Response Structure

• (dict) –

  • id (string) –

    The store’s ID.

  • reference (dict) –

    The store’s genome reference.

    Note

    This is a Tagged Union structure. Only one of the following top level keys will be set: referenceArn. If a client receives an unknown member it will set SDK_UNKNOWN_MEMBER as the top level key, which maps to the name or tag of the unknown member. The structure of SDK_UNKNOWN_MEMBER is as follows:

    'SDK_UNKNOWN_MEMBER': {'name': 'UnknownMemberName'}
    

    • referenceArn (string) –

      The reference’s ARN.

  • status (string) –

    The store’s status.

  • storeArn (string) –

    The store’s ARN.

  • name (string) –

    The store’s name.

  • description (string) –

    The store’s description.

  • sseConfig (dict) –

    The store’s server-side encryption (SSE) settings.

    • type (string) –

      The encryption type.

    • keyArn (string) –

      An encryption key ARN.

  • creationTime (datetime) –

    When the store was created.

  • updateTime (datetime) –

    When the store was updated.

  • tags (dict) –

    The store’s tags.

    • (string) –

      • (string) –

  • storeOptions (dict) –

    The store’s parsing options.

    Note

    This is a Tagged Union structure. Only one of the following top level keys will be set: tsvStoreOptions. If a client receives an unknown member it will set SDK_UNKNOWN_MEMBER as the top level key, which maps to the name or tag of the unknown member. The structure of SDK_UNKNOWN_MEMBER is as follows:

    'SDK_UNKNOWN_MEMBER': {'name': 'UnknownMemberName'}
    

    • tsvStoreOptions (dict) –

      File settings for a TSV store.

      • annotationType (string) –

        The store’s annotation type.

      • formatToHeader (dict) –

        The store’s header key to column name mapping.

        • (string) –

          • (string) –

      • schema (list) –

        The store’s schema.

        • (dict) –

          • (string) –

            • (string) –

  • storeFormat (string) –

    The store’s annotation file format.

  • statusMessage (string) –

    A status message.

  • storeSizeBytes (integer) –

    The store’s size in bytes.

  • numVersions (integer) –

    An integer indicating how many versions of an annotation store exist.

Exceptions

• Omics.Client.exceptions.InternalServerException

• Omics.Client.exceptions.ThrottlingException

• Omics.Client.exceptions.ValidationException

• Omics.Client.exceptions.ResourceNotFoundException

• Omics.Client.exceptions.AccessDeniedException