Omics / Client / get_read_set_import_job

get_read_set_import_job#

Omics.Client.get_read_set_import_job(**kwargs)#

Gets information about a read set import job.

See also: AWS API Documentation

Request Syntax

response = client.get_read_set_import_job(
    id='string',
    sequenceStoreId='string'
)
Parameters:

  • id (string) –

    [REQUIRED]

    The job’s ID.

  • sequenceStoreId (string) –

    [REQUIRED]

    The job’s sequence store ID.

Return type:

dict

Returns:

Response Syntax

{
    'id': 'string',
    'sequenceStoreId': 'string',
    'roleArn': 'string',
    'status': 'SUBMITTED'|'IN_PROGRESS'|'CANCELLING'|'CANCELLED'|'FAILED'|'COMPLETED'|'COMPLETED_WITH_FAILURES',
    'statusMessage': 'string',
    'creationTime': datetime(2015, 1, 1),
    'completionTime': datetime(2015, 1, 1),
    'sources': [
        {
            'sourceFiles': {
                'source1': 'string',
                'source2': 'string'
            },
            'sourceFileType': 'FASTQ'|'BAM'|'CRAM'|'UBAM',
            'status': 'NOT_STARTED'|'IN_PROGRESS'|'FINISHED'|'FAILED',
            'statusMessage': 'string',
            'subjectId': 'string',
            'sampleId': 'string',
            'generatedFrom': 'string',
            'referenceArn': 'string',
            'name': 'string',
            'description': 'string',
            'tags': {
                'string': 'string'
            },
            'readSetId': 'string'
        },
    ]
}

Response Structure

  • (dict) –

    • id (string) –

      The job’s ID.

    • sequenceStoreId (string) –

      The job’s sequence store ID.

    • roleArn (string) –

      The job’s service role ARN.

    • status (string) –

      The job’s status.

    • statusMessage (string) –

      The job’s status message.

    • creationTime (datetime) –

      When the job was created.

    • completionTime (datetime) –

      When the job completed.

    • sources (list) –

      The job’s source files.

      • (dict) –

        A source for an import read set job.

        • sourceFiles (dict) –

          The source files’ location in Amazon S3.

          • source1 (string) –

            The location of the first file in Amazon S3.

          • source2 (string) –

            The location of the second file in Amazon S3.

        • sourceFileType (string) –

          The source’s file type.

        • status (string) –

          The source’s status.

        • statusMessage (string) –

          The source’s status message.

        • subjectId (string) –

          The source’s subject ID.

        • sampleId (string) –

          The source’s sample ID.

        • generatedFrom (string) –

          Where the source originated.

        • referenceArn (string) –

          The source’s genome reference ARN.

        • name (string) –

          The source’s name.

        • description (string) –

          The source’s description.

        • tags (dict) –

          The source’s tags.

          • (string) –

            • (string) –

        • readSetId (string) –

          The source’s read set ID.

Exceptions