Omics / Client / update_annotation_store

update_annotation_store

Omics.Client.update_annotation_store(**kwargs)

Updates an annotation store.

See also: AWS API Documentation

Request Syntax

response = client.update_annotation_store(
    name='string',
    description='string'
)

Parameters:

• name (string) –

  [REQUIRED]

  A name for the store.

• description (string) – A description for the store.

Return type:

dict

Returns:

Response Syntax

{
    'id': 'string',
    'reference': {
        'referenceArn': 'string'
    },
    'status': 'CREATING'|'UPDATING'|'DELETING'|'ACTIVE'|'FAILED',
    'name': 'string',
    'description': 'string',
    'creationTime': datetime(2015, 1, 1),
    'updateTime': datetime(2015, 1, 1),
    'storeOptions': {
        'tsvStoreOptions': {
            'annotationType': 'GENERIC'|'CHR_POS'|'CHR_POS_REF_ALT'|'CHR_START_END_ONE_BASE'|'CHR_START_END_REF_ALT_ONE_BASE'|'CHR_START_END_ZERO_BASE'|'CHR_START_END_REF_ALT_ZERO_BASE',
            'formatToHeader': {
                'string': 'string'
            },
            'schema': [
                {
                    'string': 'LONG'|'INT'|'STRING'|'FLOAT'|'DOUBLE'|'BOOLEAN'
                },
            ]
        }
    },
    'storeFormat': 'GFF'|'TSV'|'VCF'
}

Response Structure

• (dict) –

  • id (string) –

    The store’s ID.

  • reference (dict) –

    The store’s genome reference.

    Note

    This is a Tagged Union structure. Only one of the following top level keys will be set: referenceArn. If a client receives an unknown member it will set SDK_UNKNOWN_MEMBER as the top level key, which maps to the name or tag of the unknown member. The structure of SDK_UNKNOWN_MEMBER is as follows:

    'SDK_UNKNOWN_MEMBER': {'name': 'UnknownMemberName'}
    

    • referenceArn (string) –

      The reference’s ARN.

  • status (string) –

    The store’s status.

  • name (string) –

    The store’s name.

  • description (string) –

    The store’s description.

  • creationTime (datetime) –

    When the store was created.

  • updateTime (datetime) –

    When the store was updated.

  • storeOptions (dict) –

    Parsing options for the store.

    Note

    This is a Tagged Union structure. Only one of the following top level keys will be set: tsvStoreOptions. If a client receives an unknown member it will set SDK_UNKNOWN_MEMBER as the top level key, which maps to the name or tag of the unknown member. The structure of SDK_UNKNOWN_MEMBER is as follows:

    'SDK_UNKNOWN_MEMBER': {'name': 'UnknownMemberName'}
    

    • tsvStoreOptions (dict) –

      File settings for a TSV store.

      • annotationType (string) –

        The store’s annotation type.

      • formatToHeader (dict) –

        The store’s header key to column name mapping.

        • (string) –

          • (string) –

      • schema (list) –

        The store’s schema.

        • (dict) –

          • (string) –

            • (string) –

  • storeFormat (string) –

    The annotation file format of the store.

Exceptions

• Omics.Client.exceptions.InternalServerException

• Omics.Client.exceptions.ThrottlingException

• Omics.Client.exceptions.ValidationException

• Omics.Client.exceptions.ResourceNotFoundException

• Omics.Client.exceptions.AccessDeniedException